Science In My Fiction

And what rough beast, its hour come round at last,
Slouches towards Bethlehem to be born?

— William Butler Yeats, “Second Coming”

The last few years have been heady for planet hunters. First the hot Jupiters; then the will-o’-the-wisp Glieslings and their cousins; and in the last year, the results from the Kepler mission which detected planetary systems in the low thousands; one of these is Kepler 22.

Kepler 22 is a G5 type star (our sun is G2, about 10% bigger and hotter) 600 light years away with a planetary entourage. For anyone who was in a sequestered jury room or a silently running nuclear submarine, what got splashed across the news media on December 5 was the confirmation that one of the Keplerings is a super-Earth (2.4 times the radius of our planet) that is solidly within the habitable zone of its primary – habitable defined as the region where water can remain liquid. It circles its primary in 289 days and its estimated average temperature is a balmy 22 C/75 F if (big if) it has an atmosphere thick enough for a mild greenhouse effect.

That’s what we know, and it’s important and exciting enough. Here’s what we don’t know, which makes the exclamations of “Twin Earth!” annoying: we don’t know its mass (though the wobble velocity puts an upper limit of 36 Earth masses on it), its composition, the composition of its atmosphere or if it has any moons. Equally annoying are the suggestions to name it The Christmas Planet or the barely less mawkish Hope, right down there with the naming of putative Gliese 581g something like Betty (not even Elizabeth, which at least would celebrate an unforgettable historic figure, plus several literary ones).

The Kepler findings are pinning down the still-loose middle terms of the Drake equation by strongly indicating that most suns have planetary systems, and most planets are of the small rocky variety. Of the approximately 2,000 systems Kepler tentatively identified, about fifty have planets within the habitable zone, of which perhaps ten are “Earth-like” (loosely defined).

Half a percent may not sound like much. But given the quarter trillion suns in our galaxy, the numbers mount up quickly. Plus, of course, the size and location of the newcomer inevitably raises expectations: if Kepler 22b is rocky and has decent amounts of water and a reasonably thick atmosphere, the probability of life moves into the “likely” zone. So it’s not surprising that the Allen Array turned its dishes in the direction of Kepler 22 (no requests for Warren Zevon yet, but the night is still young) – or that the concept art is coming in thick and fast.

It is a great pity that Kepler 22b is so far. Even expeditions with quasi-exotic propulsion systems (or exceptionally nice humans in flawless arkships) would take a long time to reach it. But the lengthening list of not-quite-Earths is a powerful enticement not to abandon the faltering beacon of space exploration. Once again, I will close with what I said about Gliese 581g:

“Whether [Kepler 22b] is so hospitable that we could live there or so hostile that we could only visit it vicariously through robotic orbiters and rovers, if it harbors life — even bacterial life, often mistakenly labeled “simple” — the impact of such a discovery will exceed that of most other discoveries combined. Unless supremely advanced Kardashev III level aliens seeded the galaxy like the Hainish in Ursula Le Guin’s Ekumen, this life will be an independent genesis, enabling biologists to define which requirements for life are universal and which are parochial.

At this point, we cannot determine if [Kepler 22b] has an atmosphere, let alone life signatures. If it has non-technological life, without a doubt it will be so different that we may not recognize it. Nor is it a given, despite our fond dreaming in science fiction, that we will be able to communicate with it if it is sentient. In practical terms, a second life sample may exist much closer to home — on Mars, Europa, Titan or Enceladus. But those who are enthusiastic about this discovery articulate something beyond its potential seismic impact on biology and culture: the desire of humanity for companions among the sea of stars, a potent myth and an equally potent engine for exploration.”

Image: 1st, one of the four Kepler 22b imaginings by space artist Ron Miller. 2nd, comparison of Sol and Kepler 22 (NASA/Ames/JPL).

Postscript: Immediately after my discussion of Kepler 22b, Christopher Jones interviewed me for Trek.fm. He asked me many interesting questions about the 100-Year Starship symposium, long-generation starships and the future of humanity on- and off-earth. You can hear the interview here.

– paraphrasing The Sayer of the Law.

When franchises get stale, Hollywood does reboots — invariably a prequel that tells an origin story retrofitted to segue into already-made sequels either straight up (Batman, X-Men) or in multi-universe alternatives (Star Trek). Given the iconic status of the Planet of the Apes original, a similar effort was a matter of time and CGI.

In The Rise of the Planet of the Apes, we get the origin story with nods to the original: throwaway references to the loss of crewed starship Icarus on its way to Mars; a glimpse of Charlton Heston; the future ape liberator playing with a Lego Statue of Liberty. As Hollywood “science” goes, it’s almost thoughtful, even borderline believable. The idea that the virus that uplifts apes is lethal to humans is of course way too pat, but it lends plausibility to the eventual ape dominion without resorting to the idiotic Ewok-slings-overcome-Stormtrooper-missiles mode. On the other hand, the instant rise to human-level feats of sophistication is ridiculous (more of which anon), to say nothing of being able to sail through thick glass panes unscathed.

The director pulled all the stops to make us root for the cousins we oppress: the humans are so bland they blend with the background, the bad guys mistreat the apes with callous glee… and the hero, the cognitively enhanced chimpanzee Caesar (brought to disquieting verisimilitude of life by Andy Serkis), not only fights solely in defense of his chosen family… but to underline his messianic purity he has neither sex drive nor genitals. This kink underlines the high tolerance of US culture for violence compared to its instant vapors over any kind of sex; however, since Project Nim partly foundered on this particular shoal, perhaps it was a wise decision.

As it transpires, Ceasar is exposed to little temptation to distract him from his pilgrimage: there are no female hominids in the film, except for the maternal vessel who undergoes the obligatory death as soon as she produces the hero and a cardboard cutout helpmate there to mouth the variants of “There are some things we weren’t meant to do” — and as assurance that the human protagonist is not gay, despite his nurturing proclivities. Mind you, the lack of a mother and her female alliances would make Caesar (augmented cortex notwithstanding) a permanent outcast among his fellows, who determine status matrilinearly given the lack of defined paternity.

Loyal to human tropes, Caesar goes from Charly to Che through the stations-of-the-cross character development arc so beloved of Campbel/lites. Nevertheless, we care what happens to him because Serkis made him compelling and literally soulful. Plus, of course, Caesar’s cause is patently just. The film is half Spartacus turning his unruly gladiators into a disciplined army, half Moses taking his people home — decorated with the usual swirls of hubris, unintended consequences, justice, equality, compassion, identity and empathy for the Other.

Needless to say, this reboot revived the topic of animal uplift, a perennial favorite of SF (and transhumanist “science” which is really a branch of SF, if not fantasy). Human interactions with animals have been integral to all cultures. Myths are strewn with talking animal allies, from Puss in Boots to A Boy and His Dog. Beyond their obvious practical and symbolic uses, mammals in particular are the nexus of both our notions of exceptionalism and our ardent wish for companionship. Our fraught relationship with animals also mirrors preoccupations of respective eras. In Wells’ Victorian England, The Island of Dr. Moreau struggled with vivisection whereas Linebarger’s Instrumentality Underpeople and the original Planet of the Apes focused on racism (plus, in the latter, the specter of nuclear annihilation). Today’s discussions of animal uplift are really a discussion over whether our terrible stewardship can turn benign — or at least neutral — before our inexorable spread damages the planet’s biosphere past recovery.

When SF posits sentient mammal-like aliens, it usually opts for predators high in human totem poles (Anderson’s eagle-like Ythrians, Cherryh’s leonine Hani). On the other hand, SF’s foremost uplift candidates are elephants, cetaceans – and, of course, bonobos and chimpanzees. All four species share attributes that make them theoretically plausible future companions: social living, so they need to use complex communication; relative longevity, so they can transmit knowledge down the generations; tool use; and unmistakable signs of self-awareness.

Uplift essentially means giving animals human capabilities – primary among them high executive functions and language. One common misconception seems to be that if we give language to near-cousins, they will end up becoming hairy humans. Along those lines, in Rise chimpanzees, gorillas and orangutans are instantly compatible linguistically, emotionally, mentally and socially. In fact, chimpanzees are far closer to us than they are to the other two ape species (with orangutans being the most distant). So although this pan-panism serves the plot and prefigures the species-specific occupations shown in the Ape pre/sequels, real-life chances of such coordination, even with augmentation, are frankly nil.

There is, however, a larger obstacle. Even if a “smart bomb” could give instant language processing capability, it would still not confer the ability to enunciate clearly, which is determined by the configuration of the various mouth/jaw/throat parts. Ditto for bipedal locomotion. Uplift caused by intervention at whatever level (gene therapy, brain wiring, grafts) cannot bring about coordinated changes across the organism unless we enter the fantasy domain of shapeshifting. This means that a Lamarckian shift in brain wiring will almost certainly result in a seriously suboptimal configuration unlikely to thrive individually or collectively. This could be addressed by singlet custom generation, as is shown for reynards in Crowley’s Beasts, but it would make such specimens hothouse flowers unlikely to propagate unaided, much less become dominant.

In this connection, choosing to give Caesar speech was an erosion of his uniqueness. Of course, if bereft of our kind of speech he would not be able to give gruff Hestonian commands to his army: they would be reliant on line of sight and semaphoring equivalents. However, sticking to complex signed language (which bonobos at least appear capable of, if they acquire it within the same developmental time window as human infants) would keep Caesar and his people uncanny and alien, underlining the irreducible fact of their non-human sentience.

Which brings us to the second fundamental issue of uplift. Even if we succeed in giving animals speech and higher executive functions, they will not be like us. They won’t think, feel, react as we do. They will be true aliens. There is nothing wrong with that, and such congress might give us a preview of aliens beyond earth, should SETI ever receive a signal. However, given how humans treat even other humans (and possibly how Cro-Magnons treated Neanderthals), it is unlikely we’ll let uplifted animals go very far past pet, slave or trophy status. In this, at least, Caesar’s orangutan councillor is right: “Human no like smart ape,” no matter how piously we discuss the ethics of animal treatment and our responsibilities as technology wielders.

“Nothing is as soft as water, yet who can withstand the raging flood?”
– Lao Ma in Xena (The Debt I)

Being a research scientist as well as a writer, reader and reviewer of popular science and speculative fiction, I’ve frequently bumped up against the fraught question of what constitutes “hard” SF. It appears regularly on online discussions, often coupled with lamentations over the “softening” of the genre that conflate the upper and lower heads.

In an earlier round, I discussed why I deem it vital that speculative fiction writers are at least familiar with the questing scientific mindset and with basic scientific principles (you cannot have effortless, instant shapeshifting… you cannot have cracks in black hole event horizons… you cannot transmute elements by drawing pentagrams on your basement floor…), if not with a modicum of knowledge in the domains they explore.

So before I opine further, I’ll give you the punchline first: hard SF is mostly sciency and its relationship to science is that of truthiness to truth. Remember this phrase, grasshoppahs, because it may surface in a textbook at some point.

For those who will undoubtedly hasten to assure me that they never pollute their brain watching Stephen Colbert, truthiness is “a ‘truth’ that a person claims to know intuitively ‘from the gut’ without regard to evidence, logic, intellectual examination, or facts.” Likewise, scienciness aspires to the mantle of “real” science but in fact is often not even grounded extrapolation. As Colbert further elaborated, “Facts matter not at all. Perception is everything.” And therein lies the tale of the two broad categories of what gets called “hard” SF.

Traditionally, “hard” SF is taken to mean that the story tries to violate known scientific facts as little as possible, once the central premise (usually counter to scientific facts) has been chosen. This is how authors get away with FTL travel and werewolves. The definition sounds obvious but it has two corollaries that many SF authors forget to the serious detriment of their work.

The first is that the worldbuilding must be internally consistent within each secondary universe. If you envision a planet circling a double sun system, you must work out its orbit and how the orbit affects the planet’s geology and hence its ecosystems. If you show a life form with five sexes, you must present a coherent picture of their biological and social interactions. Too, randomness and arbitrary outcomes (often the case with sloppily constructed worlds and lazy plot-resolution devices) are not only boring, but also anxiety-inducing: human brains seek patterns automatically and lack of persuasive explanations makes them go literally into loops.

The second is that verisimilitude needs to be roughly even across the board. I’ve read too many SF stories that trumpet themselves as “hard” because they get the details of planetary orbits right while their geology or biology would make a child laugh – or an adult weep. True, we tend to notice errors in the domains we know: writing workshop instructors routinely intone that authors must mind their p’s and q’s with readers familiar with boats, horses and guns. Thus we get long expositions about stirrups and spinnakers while rudimentary evolution gets mangled faster than bacteria can mutate. Of course, renaissance knowledge is de facto impossible in today’s world. However, it’s equally true that never has surface-deep research been as easy to accomplish (or fake) as now.

As I said elsewhere, the physicists and computer scientists who write SF need to absorb the fact that their disciplines don’t confer automatic knowledge and authority in the rest of the sciences, to say nothing of innate understanding and/or writing technique. Unless they take this to heart, their stories will read as variants of “Once the rockets go up, who cares on what they come down?” (to paraphrase Tom Lehrer). This mindset leads to cognitive dissonance contortions: Larry Niven’s work is routinely called “hard” SF, even though the science in it – including the vaunted physics – is gobbledygook, whereas Joan Slonczewski’s work is deemed “soft” SF, even though it’s solidly based on recognized tenets of molecular and cellular biology. And in the real world, this mindset has essentially doomed crewed planetary missions (of which a bit more anon).

Which brings us to the second definition of “hard” SF: style. Many “hard” SF wannabe-practitioners, knowing they don’t have the science chops or unwilling to work at it, use jargon and faux-manliness instead. It’s really the technique of a stage magician: by flinging mind-numbing terms and boulder-sized infodumps, they hope to distract their readers from the fact that they didn’t much bother with worldbuilding, characters – sometimes, not even plots.

Associated with this, the uglier the style, the “harder” the story claims to be: paying attention to language is for sissies. So is witty dialogue and characters that are more than cardboard cutouts. If someone points such problems out, a common response is “It’s a novel of ideas!” The originality of these ideas is often moot: for example, AIs and robots agonizing over their potential humanity stopped being novel after, oh, Metropolis. Even if a concept is blinding in its brilliance, it still requires subtlety and dexterity to write such a story without it devolving into a manual or a tract. Among other things, technology tends to be integral in a society even if it’s disruptive, and therefore it’s almost invariably submerged. When was the last time someone explained at length in a fiction piece (a readable one) how a phone works? Most of us have a hazy idea at best how our tools work, even if our lives depend on such knowledge.

To be fair, most writers start with the best of intentions as well as some talent. But as soon as they or their editors contract sequelitis, they often start to rely on shorthand as much as if they were writing fanfiction (which many do in its sanctioned form, as tie-ins or posthumous publication of rough notes as “polished products”). Once they become known names, some authors rest on their laurels, forgetting that this is the wrong part of the anatomy for placing wreaths.

Of course, much of this boils down to personal taste, mood of the moment and small- and large-scale context. However, some of it is the “girl cooties” issue: in parallel with other domains, as more and more women have entered speculative fiction, what remains “truly masculine” — and hence suitable for the drum and chest beatings of Tin… er, Iron Johns — has narrowed. Women write rousing space operas: Cherryh and Friedman are only the most prominent names in a veritable flood. Women write hard nuts-and-bolts SF, starting with Sheldon, aka Tiptree, and continuing with too many names to list. Women write cyberpunk, including noir near-future dystopias (Scott, anyone?). What’s a boy to do?

Some boys decide to grow up and become snacho men or, at least, competent writers whose works are enjoyable if not always challenging. Others retreat to their treehouse, where they play with inflatable toys and tell each other how them uppity girls and their attendant metrosexual zombies bring down standards: they don’t appreciate fart jokes and after about a week they get bored looking at screwdrivers of various sizes. Plus they talk constantly and use such nasty words as celadon and susurrus! And what about the sensawunda?

I could point out that the sense of wonder so extolled in Leaden Era SF contained (un)healthy doses of Manifesty Destiny. But having said that, I’ll add that a true sense of wonder is a real requirement for humans, and not that high up in the hierarchy of needs, either. We don’t do well if we cannot dream the paths before us and, by dreaming, help shape them.

I know this sense of wonder in my marrow. I felt it when I read off the nucleotides of the human gene I cloned and sequenced by hand. I feel it whenever I see pictures sent by the Voyagers, photos of Sojourner leaving its human-proxy steps on Mars. I feel it whenever they unearth a brittle parchment that might help us decipher Linear A. This burning desire to know, to discover, to explore, drives the astrogators: the scientists, the engineers, the artists, the creators. The real thing is addictive, once you’ve experienced it. And like the extended orgasm it resembles, it cannot be faked unless you do such faking for a living.

This sense of wonder, which I deem as crucial in speculative fiction as basic scientific literacy and good writing, is not tied to nuts and bolts. It’s tied to how we view the world. We can stride out to meet and greet it in all its danger, complexity and glory. Or we can hunker in our bunkers, like Gollum in his dank cave and hiss how those nasty hobbitses stole our preciouss.

SF isn’t imploding because it lost the fake/d sensawunda that stood in for real imaginative dreaming, just as NASA isn’t imploding because its engineers are not competent (well, there was that metric conversion mixup…). NASA, like the boys in the SF treehouse, is imploding because it forgot — or never learned — to tell stories. Its mandarins deemed that mesmerizing stories were not manly. Yet it’s the stories that form and guide principles, ask questions that unite and catalyze, make people willing to spend their lives on knowledge quests. If the stories are compelling, their readers will remember them after they finish them. And that long dreaming will lead them to create the nuts and bolts that will launch starships.

Images: 1st, Stormtrooper Walking from Grimm’s Pictures; 2nd, the justly famous Sidney Harris classic from What’s So Funny About Science?; 3rd, Jim Parsons, The Big Bang Theory’s Sheldon Cooper, photo by Robert Trachtenberg for Rolling Stone; 4th, The Gate, by Peter Cassidy.

Note: This is part of a lengthening series on the tangled web of interactions between science, SF and fiction. Previous rounds:

Why Science Needs SF
Why SF Needs Science
Why SF Needs Empathy
Why SF Needs Literacy
Why SF Needs Others

I guess this one might be called Why SF Needs Fiction!

Note: This is the second of two articles in which I discuss the NASA “arsenic bacterium” debacle. The previous one is Arsenic and Odd Lace.

“Those whom the gods wish to destroy they first make mad.” – Anonymous ancient proverb

In the 1961 film The Guns of Navarone, Greek resistance fighters and Allied demolition experts set out to destroy a nest of large cannons so that a rescue convoy can go through the straits the guns overlook. A young Greek who’s part of the mission goes after a group of Germans gunslinger-style, jeopardizing the venture. The Germans cut him to ribbons. When the mission members meet at their rendezvous point, his sister María (Iríni Pappás) says to his partner Andréas (Anthony Quinn, obligatory at that time whenever swarthy ethnics were required): “Tell me what happened.” Andréas replies: “He forgot why we came.”

María tries to keep her brother focused on the mission.

Last week, NASA administrators forgot why we came. They forgot the agency’s mission, they forgot science, they forgot their responsibility to their own people and to the public. Instead, they apparently decided that all publicity is good, as long as they don’t misspell your name.

Ever since I became fully conscious, I’ve dreamed of humanity exploring the stars. These dreams were part of the reason I left my culture, my country, my family and came over here, determined to do research. Every launch made my heart leap. I wept when I saw the images sent by the Voyagers, Sojourner negotiating Martian rocks. I kept thinking that perhaps in my lifetime we might find an unambiguous independent life sample. Then, at long last, astrobiology would lift off and whole new scientific domains would unfurl and soar with it.

Instead of that, last week we got bacterial isolate GFAJ-1. We got an agency which appears so desperate that it shoved experiments with inadequate controls into a high profile journal and then shouted from the rooftops that its researchers had discovered a new form of life (de facto false, even if the results of the increasingly beleaguered Science paper stand).

This is not the first or only time NASA administrators have been callously cavalier. Yet even though the latest debacle didn’t claim lives like the Challenger incident did, it was just as damaging in every other way. And whereas the Challenger disaster was partly instigated by pressure from the White House (Reagan needed an exclamation point for his State of the Union address), this time the hole in NASA’s credibility is entirely self-inflicted. Something went wrong in the process, and all the gatekeeping functions failed disastrously.

Let’s investigate a major claim in the Science paper: that GFAJ-1 bacteria incorporate arsenic in their DNA, making them novel, unique, a paradigm shift. Others have discussed the instability of the arsenate intermediates and of any resulting backbone. Three more points are crucial:

1. This uniqueness (not yet proved) has come about by non-stop selection pressure in the laboratory, not by intrinsic biochemistry: the parent bacterium in its normal environment uses garden-variety pathways and reverts to them as soon as the pressure is lifted. This makes the “novel life” claim patently incorrect and the isolate no more exotic than the various metallophores and metallovores that many groups in that domain (Penny Boston, Ken Nealson) have been studying for decades.

2. The arsenic-for-phosphorus substitution in the DNA is circumstantial at best. The paper contained no sequencing, no autoradiography, no cesium chloride density gradients. These are low-tech routine methods that nevertheless would give far more direct support to the authors’ claims. Density gradients are what Meselson and Stahl used in 1958 to demonstrate that DNA replication was semi-conservative. Instead, Wolfe-Simon et al. used highly complex techniques that gave inconclusive answers.

The Meselson and Stahl experiment

The reagents for the methods I just listed would cost less than $1,000 (total, not each). A round of sequencing costs $10 – the price of a Starbucks latte. In a subsequent interview, Oremland (the paper’s senior author) said that they did not have enough money to do more experiments. This is like saying that you hired the Good Year blimp to take you downtown but didn’t have enough money for a taxi back home.

3. Even if some of the bacteria incorporate arsenic in their DNA, it means nothing if they cannot propagate. Essentially, they can linger as poison-filled zombies that will nonetheless register as “alive” through such tests as culture turbidity and even sluggish metabolism.

NASA spokespeople, as well as Wolfe-Simon and Oremland, have stated that the only legitimate and acceptable critiques are those that will appear in peer-reviewed venues – and that others are welcome to do experiments to confirm or disprove their findings.

The former statement is remarkably arrogant and hypocritical, given the NASA publicity hyperdrive around the paper: embargoes, synchronized watches, melodramatic hints of “new life”, of a discovery with “major impact on astrobiology and the search for extraterrestrial life”. This is called leading with your chin. And if you live by PR, you cannot act shocked and dismayed when you die by PR.

As for duplicating the group’s experiments, the burden of proof lies with the original researchers. This burden increases if their claims are extraordinary. The team that published the paper was being paid to do the work by a grant (or, possibly, by earmarked NASA money, which implies much less competition). For anyone else to confirm or disprove their findings, they will have to carve effort, time and money out of already committed funds — or apply for a grant specifically geared to this, and wait for at least a year (usually more) for the money to be awarded. It’s essentially having to clean up someone else’s mess on your own time and dime.

Peer review is like democracy: it’s the worst method, except for all others. It cannot avoid agendas, vendettas, pet theories or hierarchies. But at least it does attempt judgment by one’s peers. Given the kernel of this paper, its reviewers should have been gathered from several disciplines. I count at least four: a microbiologist with expertise in extremophiles, a molecular biologist specializing in nucleic acids, a biochemist studying protein and/or lipid metabolism and a biophysicist versed in crystallography and spectrometry.

Some journals have started to name reviewers; Science does not, and “astrobiology” is a murky domain. If the scientific community discovers that the reviewers for the GFAJ-1 paper were physicists who write sciency SF and had put on the astrobio hat for amusement and/or convenience, Lake Mono will look mild and hospitable compared to the climate that such news will create.

Because of the way scientific publishing works, a lot of shaky papers appear that never get corrected or retracted. As a dodge, authors routinely state that “more needs to be done to definitively prove X.” Even if later findings of other labs completely contradict their conclusions, they can argue that the experiments were correct, if not their interpretation. Colleagues within each narrow domain know these papers and/or labs – and quietly discount them. But if such results get media attention (which NASA courted for this paper), the damage is irreversible.

People will argue that science is self-correcting. This is true in the long run – and as long as science is given money to conduct research. However, the publication of that paper in Science was a very public slap in the face of scientists who take time and effort to test their theories. NASA’s contempt for the scientific process (and for basic intelligence) during this jaw-dropping spectacle was palpable. It blatantly endorsed perceived “sexiness” and fast returns at the expense of careful experimentation. This is the equivalent of rewarding the mindset and habits of hedge fund managers who walk away with other people’s lifelong savings.

By disbursing hype, NASA administrators handed ready-made ammunition to the already strong and growing anti-intellectual, anti-scientific groups in US society: to creationists and proponents of (un)intelligent design; to climate change denialists and young-earth biblical fundamentalists; to politicians who have been slashing everything “non-essential” (except, of course, war spending and capital gains income). It jeopardized the still-struggling discipline of astrobiology. And it jeopardized the future of a young scientist who is at least enthusiastic about her research even if her critical thinking needs a booster shot – or a more rigorous mentor.

Quiros circus, Spain 2007

Perhaps NASA’s administrators were under pressure to deliver something, anything to stave off further decrease of already tight funds. I understand their position – and even more, that of their scientists. NIH and NSF are in the same tightening vise, and the US has lost several generations of working scientists in the last two decades. Everyone is looking for brass rings because it’s Winner Take All – and “all” is pennies. We have become beggars scrambling for coins tossed out of rich people’s carriages, buskers and dancing bears, lobsters in a slowly heating pot.

NASA should not have to resort to circus acts as the price for doing science. It’s in such circumstances that violence is done to process, to rigor, to integrity. We are human. We have mortgages and doctors’ bills and children to send to college, yes. But we are scientists, first and foremost. We are – must be – more than court jesters or technicians for the powerful. If we don’t hold the line, no one else will.

The paper: Wolfe-Simon F, Blum JS, Kulp TR, Gordon GW, Hoeft SE, Pett-Ridge J, Stolz JF, Webb SM, Weber PK, Davies PCW, Anbar AD, Oremland RS (2010) A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus. DOI: 10.1126/science.1197258.

Gliese 581 may be small as stars go, but it looms huge in the vision field of planetfinders.  As of late last week, measurements indicate the system has six planets of which three are Earth-size and -type, within the star’s habitable zone, with stable, near-circular orbits.

The Gliese 581 system has a persistent will-o-the-wisp quality.  Almost each of its planets (c, d, e and now g) has been pronounced in turn to pass the Goldilocks test, only to have expectations shrink when the data get analyzed further.  The first frisson of excitement arose when 581c was determined to be Earth-type, which quickened the usual speculations: atmosphere? water? life?  We don’t know yet and our current instruments cannot detect biosignatures at that distance (short of an unencrypted request for more Chuck Berry).  But there are some things we do know.

Gliese 581 is a red dwarf, a BY Draconis variable.  This makes it long-lived; on the minus side, it may produce flares and is known to emit X-rays.  Planets in its habitable zone are so close to it that they are tidally locked, always presenting the same face to their star.  The temperature differentials resulting from the lock imply hurricane-force winds and tsunami-like tides.  Gliese 581g, like 581c, is large enough to retain an atmosphere; the hope is that, unlike 581c or Venus, its specific circumstances have not resulted in a runaway greenhouse effect.

The real paradigm shift is the discovery that this solar system has many earth-size rocky planets, in contrast to the hot-Jupiter/hot-Neptune preponderance in most others.  The second enticing attribute of Gliese 581 is its relative closeness — a distance of merely 20 light years.  It is still millennia away by our present propulsion systems.  But I nurse the dream that if we see anything remotely resembling a biosignature, we will strive to reach it.  In the meantime, I suggest we give it a name that fires the imagination.  Perhaps Yemanjá, the Yoruba great orisha of the waters, in the hope that the sympathetic magic of the name will work.  Perhaps Kokopelli, the trickster piper of the American Southwest cultures, who may entice us thither.  I will conclude with the final words of my first article on Gliese 581:

“Whether Gliese 581c [g] is so hospitable that we could live there or so hostile that we could only visit it vicariously through robotic orbiters and rovers, if it harbors life — even bacterial life, often mistakenly labeled “simple” — the impact of such a discovery will exceed that of most other discoveries combined. Unless supremely advanced Kardashev III level aliens seeded the galaxy like the Hainish in Ursula Le Guin’s Ekumen, this life will be an independent genesis, enabling biologists to define which requirements for life are universal and which are parochial.

At this point, we cannot determine if Gliese 581c [g] has an atmosphere, let alone life. If it has non-technological life, without a doubt it will be so different that we may not recognize it. Nor is it a given, despite our fond dreaming in science fiction, that we will be able to communicate with it if it is sentient. In practical terms, a second life sample may exist much closer to home — on Mars, Europa, Titan or Enceladus. But those who are enthusiastic about this discovery articulate something beyond its potential seismic impact on biology and culture: the desire of humanity for companions among the sea of stars, a potent myth and an equally potent engine for exploration.”

Images: Top, comparison of the Sun and Gliese 581 habitable zones (the diagram is by Franck Selsis, Univ. of Bordeaux; the image of 581g was originally created for 581c by Ginny Keller); bottom, Kokopelli playing his flute.

This is the first article in a series that explores the attribute of chirality (handedness), which is intrinsic to life across scales yet surprisingly absent from speculative fiction (the single time I recall a plot point hinging on it is during Mal’s battle with the Operative in Serenity).  A version of it appeared on Huffington Post.

“Light is the left hand of darkness…” – Ursula K. Le Guin

Those who are, like me, left-handed and older than fifty probably recall being forced to write with our right hand and the frustration of using many “handed” tools, including scissors, rulers and computer mice. We also remember being told that left-handers are prone to immune deficiencies, shorter lives, depression, dyslexia, schizophrenia and a host of other woes… and no wonder, given the drizzle of harassment! Finally, there is the conflation of left with evil, wrong or inept in practically all religions and languages (sinister, gauche, linkisch…) not to mention most political systems, especially those which place high value on obedience and conformity.

Left-handedness is genetically determined, although controversy swirls around candidate genes that have been tentatively linked to the trait and the complications supposed to accompany it – most prominently a protein with the impressively lengthy name of Leucine-Rich Repeat Transmembrane Neuronal 1. LRRTM1 is involved in regulation of the synapses, the tips of the neuronal processes where exchange of information takes place by molecules bridging the gaps between cells. Other theories propose that left-handedness may arise from exposure to increased testosterone during gestation. Yet others attribute it to the asymmetry of the human brain, brought about by the appearance of language whose centers almost invariably reside in the left hemisphere (which regulates the right side of the body).

In contrast to the even distribution of paw preferences in our ape cousins, the percentage of human left-handers hovers around 10% regardless of race and culture. The most common explanation for the persistence of the trait was that left-handed warriors had the element of surprise in primitive societies. As a result of this sneakiness, they survived long enough to leave a few like-handed descendants. Notice that this explanation is exclusively male-oriented and also implies that the trait is both monogenic and dominant. In fact, LRRTM1 is maternally silent – but at least in my case, I know that I inherited my quasi-ambidexterity (loaded word!) from my mother’s side.  On the other hand, nobody who has met me can conclude that I’m low on testosterone.

From my professional knowledge of biology and my own awareness of what strengths and weaknesses I possess, I hit upon a slightly more flattering explanation for the persistence of the trait. Namely, I decided that left-handed people must be less lateralized in their thinking. This can lead (literally) to crossed brain wires – and hence to such outcomes as dyslexia. But it can also lead to less mental compartmentalizing, more efficient multi-tasking, enhanced ability to see the big picture and to think across boundaries.

Recent results from several neurobiological disciplines lend support to these speculations. Apparently, left-handers do cluster at the two ends of the IQ range; the connections between the two sides of their brain are faster than in right-handers; they often use both hemispheres for language; and they excel at complicated tasks. Lists of southpaws in history show that they are disproportionately represented among mathematicians, scientists, artists and, for better or for worse, among charismatic leaders — from Alexander the Great to Jeanne d’Arc. Moreover, a disproportionate ratio of US presidents since WWII have been southpaws, partly because schoolchildren in an increasingly un-corseted culture were no longer forced into right-handedness. So left-handers may not be a relic of barbaric times, after all. Instead, they may be the hops that add zest to humanity’s beer.

Images: top, Southpaw by RobtheSentinel; bottom, an illustrious left-hander — Marie Sklodowska Curie, Physics Nobel 1903; Chemistry Nobel, 1911.

Author’s Note: This is the first SiMF post picked up for reprinting by io9 — I know it will be the first of many!

Extraterrestrial life is a staple of SF and the focus of astrobiology and SETI.  Yet whereas SF has populated countless worlds with varying success, from Tiptree’s haunting Flenni (Your Haploid Heart) to Lucas’ annoying Ewoks, real ETs remain stubbornly elusive: nobody has received a transmission demanding more Chuck Berry, and the data from the planetary probes are maddeningly inconclusive.  Equally controversial are the shadowy forms on Martian asteroid ALH84001, although the pendulum has swung toward cautious favoring of the biological possibility after scientists discovered nanobacteria on earth and water on Mars.

In part, we’re hobbled by the limits of our technology, including the problems of sample contamination and method-specific artifacts.  But we’re also severely limited by having a single life sample.  Despite its dizzying variations in form and function, extant terrestrial life arose from one source.  We know this because our genetic blueprint and its associated molecular machinery are identical across the three domains (archaea, eubacteria, eukarya).  So to be able to determine if something is alive, we need to decide what is universal and what is parochial.  We stumble through redefinitions each time our paradigms shift or our techniques achieve higher resolution.  Worse yet, our practices lag considerably behind our theories.

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(incorrectly but fittingly ascribed to Emma Goldman, feminist, activist, trouble-maker)

Those who know my outermost layer would consider me a science geek. I’m a proponent of genetic engineering, an advocate of space exploration, a reader and writer of science fiction. However, I found myself unable to warm to either transhumanism or its literary sidekick, cyberpunk. I ascribed this to the decrease of flexibility that comes with middle age and resumed reading Le Guin’s latest story cycle.

But the back of my mind gnawed over the discrepancy. After all, neither transhumanism nor cyberpunk are monolithic, they come in various shades of… and then it hit me… gray. Their worlds contain little color or sound, few scents, hardly any plants or animals. Food and sex come as pills, electric stimuli or IV drips; almost all arts and any sciences not related to individual enhancement have atrophied, along with most human activities that don’t involve VR.

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Twelve years ago, Harvard Alumni Magazine asked me why I wrote The Biology of Star Trek despite my lack of tenure.  My answer was The Double Helix: Why Science Needs Science Fiction.  In it, I described how science fiction can make science attractive and accessible, how it can fire up the dreams of the young and lead them to become scientists or, at least, explorers who aren’t content with canned answers.

The world has changed since then, the US more than most.  American culture has always proclaimed its distrust of authority.  However, the nation’s radical shift to the right also brought on disdain for all expertise – science in particular, as can be seen by the obstruction of research in stem cells and climate change and of teaching evolution in schools (to say nothing of scientist portrayals in the media, exemplified by Gaius Baltar in the aggressively regressive Battlestar Galactica reboot).

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